SCEPTR (Simple Contrastive Embedding of the Primary sequence of T cell Receptors) is a small and fast TCR langauge model that produces highly informative TCR embeddings for accurate downstream TCR specificity prediction and clustering.
A Python library that provides algorithms and visualization tools to speed up the analysis of immune repertoire sequencing data.
A lightweight software package for calculating Simpson diversity with error bars.
Software for the automated extraction of intensity-energy spectra from low-energy election diffraction patterns based on image analysis and spot tracking.
Python library for optimization of a function from noisy function evaluations using a robust pattern search algorithm with adaptive sampling or stochastic approximation